Insertion junction: CLIP2.048187_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048187
Chromosome:chromosome 12
Location:4099810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801401 (1 of 6) 2.7.7.49 - RNA-directed DNA polymerase / Revertase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAACCATAGCGCCTCCTTGGTCGCAAATGATGCCGCCATGTACTCT
Internal bar code:AGGGTGATGGACAGTTCAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:6214
LEAP-Seq percent confirming:98.374
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAAATTCGGCATGACGC
Suggested primer 2:ATACGTCTCGCTACGCACAG