Insertion junction: CLIP2.048188_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048188
Chromosome:chromosome 16
Location:7286749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677989 (1 of 2) PF06977 - SdiA-regulated (SdiA-regulated) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCATCAGAAATCGGGGTGTGGGGGGGATGGCGTGATGATGGTGTGA
Internal bar code:AAATGCGGGATGCCCTAGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCGCAGCTCAGTCCTAG
Suggested primer 2:GAGATAGGAATCCGTGGGCG