Insertion junction: CLIP2.048192_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048192
Chromosome:chromosome 10
Location:5217293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456000 FAP191 (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA); Flagellar Associated Protein191 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCTGGCTCCCCGGGCCGCACCGGGGCGGCGTGTCTGGTGTCCCTGCT
Internal bar code:GTTCCTTACACTGTCAGGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:143
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGGTGCACATGAGAACC
Suggested primer 2:CAGCAGGACCAACGTCTGAT