Insertion junction: CLIP2.048197_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048197
Chromosome:chromosome 9
Location:4822519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402589 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCTGGCACGCAAGCGGGGCGCGGACATGCACGCTGGGCTGGAGGCG
Internal bar code:GCTTGCATCAAAGGCTGAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1769
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCCAACCACAAAGGCAT
Suggested primer 2:GTTCTAGGAGATGCCTCGGC