Insertion junction: CLIP2.048201_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048201
Chromosome:chromosome 13
Location:1080843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568950 (1 of 2) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGATGGACGAGGCCACCCTCCGTGCCGTGTCACACAGGCGAGCCAG
Internal bar code:GCCGAACAAGGGTCCTCCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTCGCAACAGTACGAA
Suggested primer 2:CTGTGTCCACATCACCACGA