Insertion junction: CLIP2.048201_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048201
Chromosome:chromosome 13
Location:1080864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568950 (1 of 2) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGCCCGGGAGGGCGGGGGCACAGTACGGTAGTGCCCAGCGTGTCAGG
Internal bar code:GCCGAACAAGGGTCCTCCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTCCACATCACCACGA
Suggested primer 2:AAGGCTCGCAACAGTACGAA