Insertion junction: CLIP2.048203_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048203
Chromosome:chromosome 16
Location:2652336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661450 HTV3 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTGCCCACGCAGGTTGGAACCCCGGCGTTGACCGACATGGAGTCATA
Internal bar code:GCTATAGAACTCTCTCGTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3007
LEAP-Seq percent confirming:79.661
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTACGAGTTGTTGGCT
Suggested primer 2:TGACAACGGTCTGAGCAGTC