Insertion junction: CLIP2.048209_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048209
Chromosome:chromosome 8
Location:4384990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385000 (1 of 38) IPR000719//IPR002290//IPR011009 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTCCGCCGCTGCGGCCGCCACGGCGGCGGCCGAGCCCAGCTGCCGGC
Internal bar code:AACTGAAGGGAACGACGGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:806
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGTCTCTCTTGGACGG
Suggested primer 2:GCATTCAACTGCTCAGCACC