Insertion junction: CLIP2.048211_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048211
Chromosome:chromosome 16
Location:1158878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650350 (1 of 1) PF03457 - Helicase associated domain (HA) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGAGGTATTCGTGACAATACATCAAGCAAAAGCGATTGGCCATCGAC
Internal bar code:CTCTGCGTCGGGATGGTCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1689
LEAP-Seq percent confirming:34.2593
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:71
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACATGGCGTATTGCTG
Suggested primer 2:GCACGCATGTAAGCATCCAG