Insertion junction: CLIP2.048215_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048215
Chromosome:chromosome 13
Location:4191917
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591501 PUS2 (1 of 2) PTHR11142:SF0 - TRNA PSEUDOURIDINE SYNTHASE-LIKE 1; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGCATTGCTGTACACGGTGGATCGCAGGGACGCCTGCCGCTGCAGC
Internal bar code:CTGAACGCCGATGAGGTATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCGTTGACAGTGCCAC
Suggested primer 2:CCTCTCTCCGTACAGCAAGC