Insertion junction: CLIP2.048222_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048222
Chromosome:chromosome 14
Location:2805029
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g626600 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGCTCGATGCAGGTCGCGGAGCAGGACATCGAGGTGCGAGCGATAC
Internal bar code:AGCCGCTTGGTGATTGACCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:305
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCGATCCCAAGGTTCA
Suggested primer 2:GTCACTCCTGTGTGAGTCCG