Insertion junction: CLIP2.048236_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048236
Chromosome:chromosome 14
Location:3428766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630150 (1 of 1) PTHR10131//PTHR10131:SF52 - TNF RECEPTOR ASSOCIATED FACTOR // TNF RECEPTOR-ASSOCIATED FACTOR FAMILY PROTEIN DDB_G0268444-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCCGGGTCTCATCCGAGCGCATCGTCGCCACCGCCGCCATCGTGCC
Internal bar code:TTCGCATCGGGTTGGCGTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGACCACCACCAGACC
Suggested primer 2:CGTGTGTGTATGCGCATGAG