Insertion junction: CLIP2.048236_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048236
Chromosome:chromosome 14
Location:3428768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630150 (1 of 1) PTHR10131//PTHR10131:SF52 - TNF RECEPTOR ASSOCIATED FACTOR // TNF RECEPTOR-ASSOCIATED FACTOR FAMILY PROTEIN DDB_G0268444-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCGTCGTCCGTGTCATCCGTGATCGTGTCATCGTAGTCGTTGACATC
Internal bar code:CCCCCGCCCCCCTGCCCCTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1245
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTGTATGCGCATGAG
Suggested primer 2:CAGTGACCACCACCAGACC