Insertion junction: CLIP2.048237_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048237
Chromosome:chromosome 2
Location:7844136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146150 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGATCCGGGTGCGGGCCTGCTGGGGGCGCTAGCCGCTGCAGCTGAAGC
Internal bar code:CAAGCATTATTCTGAGCAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTACGATGCTGCTGTGT
Suggested primer 2:TGCCTCCCTGTGTTAGCAAG