Insertion junction: CLIP2.048240_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048240
Chromosome:chromosome 9
Location:2823287
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g391000 GT90F14,GT90-14 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 14 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACAAGCTTGGCCTCGGAGGTGGGTGCGTGGGTGGACGTTTTACTGTG
Internal bar code:AGTCATGCAGTGATGTTTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTTCCTCGCCTGCTCGA
Suggested primer 2:GTAGGATGGAGGTACGCGTG