Insertion junction: CLIP2.048251_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048251
Chromosome:chromosome 12
Location:5996487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGCGAGTAGCGGGGCCCTTCCGCGCAGCTGTGAGGGCCGCCGGCGCA
Internal bar code:AAGTACGCGACCAGTTCGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4335
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCTGCTGCTACTGTT
Suggested primer 2:ACGTGGTGCCTGTAACTCAG