Insertion junction: CLIP2.048267_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048267
Chromosome:chromosome 2
Location:6999214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389541 OPR9 OctotricoPeptide Repeat protein 9; (1 of 1) IPR000104//IPR011237//IPR011335//IPR013584 - Antifreeze protein, type I // Peptidase M16 domain // Restriction endonuclease type II-like // RAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGACGGTGATCCGGCCTCGGGGCCGCTACGCGGCAGGCGGCGCCGCGG
Internal bar code:TATTATTTTTCGAATAGGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:403
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTCTGCAGACCCAAATC
Suggested primer 2:TGTCCTGCAAAGCGATACGT