Insertion junction: CLIP2.048282_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048282
Chromosome:chromosome 12
Location:3975202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515650 EIF3K Eukaryotic translation initiation factor 3, subunit K; (1 of 1) K15028 - translation initiation factor 3 subunit K (EIF3K) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAAAGGCAACGGATGCGGAATCAGAGGCAACAGAGGCGCCCCGATTG
Internal bar code:AGATGACGCACGTTGCGAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4646
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCTAGCTGATGAGGCG
Suggested primer 2:CAGGGTGAGCATCCACTTGT