Insertion junction: CLIP2.048285_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048285
Chromosome:chromosome 1
Location:4285252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029000 COQ5D,UMM1,COQD2 (1 of 2) PTHR10108//PTHR10108:SF813 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED; Ubiquinone/menaquinone biosynthesis methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGATGTCCGTGGGGGCGAAACCGAGTTCTTTTACTCATTTGGTACAT
Internal bar code:CAGATCGTGTACACTACCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1600
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTTGTTGTTGACTGTC
Suggested primer 2:AGCAGGTGATCACGTCCAAG