Insertion junction: CLIP2.048290_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048290
Chromosome:chromosome 3
Location:7635406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204400 (1 of 1) K09651 - rhomboid domain-containing protein 1 [EC:3.4.21.-] (RHBDD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTACAGGATTGGTTCAACGTTAACCCCCACCCCACCCCGACTCCTCA
Internal bar code:TAAAGTCCATGAAGGTCCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:473
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAATGAAGCAGGCCTGAG
Suggested primer 2:TCTACAACATGGGCAGCCTG