Insertion junction: CLIP2.048297_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048297
Chromosome:chromosome 2
Location:1251650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081950 (1 of 19) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTGAGGCCGAACAACCGCATCGCCCGGACATAGCCGGGGTTTGTGCC
Internal bar code:AGACGTTAGTAGTCGCTTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6427
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCTGGACACGAGCAAC
Suggested primer 2:GAGTACGGACGCTAGTGCTC