Insertion junction: CLIP2.048303_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048303
Chromosome:chromosome 6
Location:7510808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301000 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAACTGTTTGCTGTCTGCTTGGGGTACGGGCGTCAGCTGCACCCTAAG
Internal bar code:GTCGCGATCAGGGCAAGATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1721
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGATCGCAGTTGTCCCTG
Suggested primer 2:TGCAGGTGCGGATAGGAAAG