Insertion junction: CLIP2.048305_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048305
Chromosome:chromosome 11
Location:767966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467630 AMI2 putative amidase; (1 of 2) 3.5.1.4 - Amidase / Acylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGGGTGCGTGGGGCGCTTTGGCTGAGCGCGTGGGTGGGCGCTGGTG
Internal bar code:GATGGGTCATTCATTATACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:452
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGGCGACAAACACATTG
Suggested primer 2:TGTGACTACGGTTTCCACGG