Insertion junction: CLIP2.048305_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048305
Chromosome:chromosome 12
Location:8305742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551100 (1 of 1) PTHR36356:SF1 - EXPRESSED PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTAGTCAGCATGCCTTGGCTCGTGACCCAGGGCGGTGCCGCTGCTGCT
Internal bar code:CTGTCGGGACTTACGAAAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2295
LEAP-Seq percent confirming:81.5789
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:152

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCTCTGCGAAGGGGTTG
Suggested primer 2:GCGGCCAAGAAGTGAGTACT