Insertion junction: CLIP2.048311_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048311
Chromosome:chromosome 2
Location:6848379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCCAACGAGTGTCCTACACGCCGGCGGCATGGCCGACCGCCTGTCGA
Internal bar code:AACAAGCACTAATCCATAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3482
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGAGGTCGACGACAGAG
Suggested primer 2:CTCTTCCAGTAGCTCCCCCT