Insertion junction: CLIP2.048325_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048325
Chromosome:chromosome 8
Location:1306471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363950 (1 of 2) PF07819 - PGAP1-like protein (PGAP1); Putative Glucan Water Dikinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTCACACGGACTGTACGCAGGCACGGACCCGAGGGCGCCGCCGGCG
Internal bar code:CAAGTATGTGATGCTTATATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:404
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCAGGTCCATCAGGTA
Suggested primer 2:CGAGTTTGGCGGTCACAATG