Insertion junction: CLIP2.048326_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048326
Chromosome:chromosome 1
Location:1733645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009575 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTCTCCTCTCCCTCTCTCCCAGCCTCCACGCACGTGCGCACCTGGCT
Internal bar code:AGGAAGTAGGTGAACTATGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3922
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTGTGTCCAGTGCAGC
Suggested primer 2:GTCTCGCTACCGCTACTCAC