Insertion junction: CLIP2.048329_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048329
Chromosome:chromosome 12
Location:5128855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801426 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCTGCCATCAGGCGCGATGTCGTACAGCAGGTTGGCGGGCTTCAGG
Internal bar code:CGTTGTTGGGCCAAAAAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3214
LEAP-Seq percent confirming:17.6471
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACCCCAATCAAGCAGGT
Suggested primer 2:CCACAACTCTGTTTGGCGTG