Insertion junction: CLIP2.048337_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048337
Chromosome:chromosome 5
Location:1067924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247851 CEP2 Cysteine endopeptidase; (1 of 2) 3.4.22.14 - Actinidain / Actinidin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCCATTCAATCCTTACTTCACCCAAACCGTACAGTAACTTTAATCCT
Internal bar code:GGTGTTCGGGATCTCATAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTTTCTCGCATTTCCT
Suggested primer 2:GGAAATGGGCATCTCCACCA