Insertion junction: CLIP2.048339_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048339
Chromosome:chromosome 9
Location:2787770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGGTGCAGAGGCCTCGCACTGCTCTTATAAGAGGGCACGGGGCAGTG
Internal bar code:AGCGACAGGTCCGCTTAGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1708
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTCCGACCCTTCTGCTC
Suggested primer 2:ATGCGACCAGTATGTAGGCG