Insertion junction: CLIP2.048340_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048340
Chromosome:chromosome 2
Location:4389320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105550 (1 of 1) IPR000104//IPR003008 - Antifreeze protein, type I // Tubulin/FtsZ, GTPase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGGAACCGACGAGGGCGGCACAGGCTCGGCCGCCTTGGCCACAGCCA
Internal bar code:ATGGGCGGTAATCCAATACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5899
LEAP-Seq percent confirming:73.3766
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:154

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGTCGACAAGTGCATCA
Suggested primer 2:AGCACCTTTTGATCGGGAGG