Insertion junction: CLIP2.048341_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048341
Chromosome:chromosome 3
Location:6253082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGGAAGTTGGCAGTAGCAGCGGCAGTGGTGGTGGGGCTGGCGATC
Internal bar code:ATGCGAATACTGGTTCGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6109
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGCTTTCACTGCTTTT
Suggested primer 2:CATGCGACGCACACACTATG