Insertion junction: CLIP2.048344_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048344
Chromosome:chromosome 3
Location:689409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145807 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTCGTGACCTCGCCTAGGCCGTGGGGCAGCTCCAGCTGTCGACTGAC
Internal bar code:AATTGAATCGACATGTTCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2573
LEAP-Seq percent confirming:99.1071
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAACGTGACTTCAACC
Suggested primer 2:CAACGAAACACACCAGGCAG