Insertion junction: CLIP2.048349_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048349
Chromosome:chromosome 12
Location:5092624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526559 (1 of 6) IPR000719//IPR002290//IPR011009//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGGGCTATGAGGCGCGGGGCGGGCGCGGTGACGGCGCCTGGTTGGC
Internal bar code:CATTTTGTACGGGGGGTCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3905
LEAP-Seq percent confirming:69.0476
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTTCAGGTGCTTGATGA
Suggested primer 2:GTCACACGTACAGACACCGT