Insertion junction: CLIP2.048356_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048356
Chromosome:chromosome 3
Location:8280675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199500 FAP129 Flagellar Associated Protein 129 intron
Cre03.g199550 (1 of 1) IPR000504//IPR012677//IPR014720 - RNA recognition motif domain // Nucleotide-binding alpha-beta plait domain // Double-stranded RNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCCTTTCTGTATTTGCCGATGGGACTCCGAGCACTTCAGCTTTATGC
Internal bar code:ACACCAGGGTGCCAATTTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5814
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCACGCTCTTGACTGTCA
Suggested primer 2:CATACCCAAGGTGGCACCAT