Insertion junction: CLIP2.048356_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048356
Chromosome:chromosome 3
Location:8280683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199500 FAP129 Flagellar Associated Protein 129 intron
Cre03.g199550 (1 of 1) IPR000504//IPR012677//IPR014720 - RNA recognition motif domain // Nucleotide-binding alpha-beta plait domain // Double-stranded RNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAACTTCAAACTGGCTGCCAGGACGTTCCCCTTCCAAACGCTATCGC
Internal bar code:GCATATGTTCGCCAGTCTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2061
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCCAAGGTGGCACCAT
Suggested primer 2:GTCCACGCTCTTGACTGTCA