Insertion junction: CLIP2.048362_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048362
Chromosome:chromosome 3
Location:6019907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTCCCAAAGCCGCGGGCAAGGATCGGCATCAACGGTTAGTGCCTAGC
Internal bar code:AGTGATTTTCCGGGTGCACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3554
LEAP-Seq percent confirming:79.3651
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAACGCACAAGAAAGCA
Suggested primer 2:AGTCAGGGTAGGCAATTGGC