Insertion junction: CLIP2.048367_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048367
Chromosome:chromosome 9
Location:2227211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395100 MKP4 (1 of 3) K14165 - atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48] (K14165); Dual-specificity protein phosphatase intron
Cre09.g801012 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAACCCCCGCTGCTTAGAGTTGTGCGTCCCCTCCCGTCTTTAGGAGG
Internal bar code:TCGATAGTAAGTTGGGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3719
LEAP-Seq percent confirming:98.9583
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGTACCGTTCCACAGGC
Suggested primer 2:CCACCGTCCTTCACAGAGTC