Insertion junction: CLIP2.048367_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048367
Chromosome:chromosome 9
Location:2227218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395100 MKP4 (1 of 3) K14165 - atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48] (K14165); Dual-specificity protein phosphatase intron
Cre09.g801012 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGAGTGCTTGCCGGGCGTCGCGGTGACCAGGGAGGGCTCGAAGGCT
Internal bar code:TCGATAGTAAGTTGGGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCGTCCTTCACAGAGTC
Suggested primer 2:TTCTGTACCGTTCCACAGGC