Insertion junction: CLIP2.048374_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048374
Chromosome:chromosome 13
Location:1220807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570250 CKIN1L,SNRK1B,CKIN2 (1 of 1) PF07714//PF14531 - Protein tyrosine kinase (Pkinase_Tyr) // Kinase-like (Kinase-like); snRK1 family in Chlamydomonas, subgroup 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTTCATGGGCGCGGACAGCCACTCGGGCGCCGTGTAGGTGCCGGCCA
Internal bar code:AGCGCCTGAAGAGAGGCAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2096
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGCACACGAATCGTTT
Suggested primer 2:AGCAAGAAATAGCTGGCCGT