Insertion junction: CLIP2.048377_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048377
Chromosome:chromosome 8
Location:3824564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381450 OPR35 OctotricoPeptide Repeat protein 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTAATGAGATAGTGCAAGCCCGCGCACCCCGTACTCCTGACTCCTTC
Internal bar code:CGTAGAGGGCGCTTAAGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGTATAGCAGGCGCGTT
Suggested primer 2:GTGCCACTCACACTTCCGTA