Insertion junction: CLIP2.048380_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048380
Chromosome:chromosome 17
Location:5610316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739900 (1 of 1) IPR012337//IPR027417 - Ribonuclease H-like domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGTGTTTGGCGGCGGCGACTTCACCTTCCCGGCGGCCGGCCCCGGCG
Internal bar code:ATAGCGCGCCACCACGCACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTTGGCGGCAACATTG
Suggested primer 2:CTGAATGTGCGCGGTATGTG