Insertion junction: CLIP2.048385_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048385
Chromosome:chromosome 2
Location:968152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079500 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS
lncRNA_TCONS_00054624 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCAGCAGTCCTCTCTATCCGACTCCCTCACCACCCTGGCCCAAGAG
Internal bar code:GGGGGTTGTGCGAGGCTTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGCTTGATCACAATCAG
Suggested primer 2:ACATGCTCGAGGCTTCCAAA