Insertion junction: CLIP2.048386_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048386
Chromosome:chromosome 9
Location:4620149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401663 (1 of 1) K14795 - ribosomal RNA-processing protein 36 (RRP36) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCTAGGGGTCAAGGGTGGGGCTGTAGATACCAGTGCAAACTAAACC
Internal bar code:GGGTACTATACGTCGTTTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCCTTGAACTTGGGGTT
Suggested primer 2:CACTCACACTCAATCGCCCT