Insertion junction: CLIP2.048396_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048396
Chromosome:chromosome 3
Location:8553500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800404 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTGCGAGTAAGCGACGTCTACGCCTACGACGCTATTTGTCGTGCAAC
Internal bar code:TGTGTGTGTGAGATTTTTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:4663
LEAP-Seq percent confirming:85.8974
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGATACGAGCGCTGCAGG
Suggested primer 2:GTAGGGCGTGTCAACCAAGA