Insertion junction: CLIP2.048398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048398
Chromosome:chromosome 4
Location:1648749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212700 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTCTCCGACAAGCGCTGCTGCTCGGCGCCGATGTTAACAGCGCCGAT
Internal bar code:AACCTGAATCTCGTGAACCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1469
LEAP-Seq percent confirming:2.63158
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:111
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGGCCTGCTGTCAATAA
Suggested primer 2:CCGCAAAACACTAACGCACA