Insertion junction: CLIP2.048400_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048400
Chromosome:chromosome 1
Location:6130025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAGCACAGCTAGCGCAGCAGCAGTTGGGTACAGCGGGCAATCGTGGG
Internal bar code:GTCTCGCTATGGTATGAAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCGAGGAGTAATGAGCA
Suggested primer 2:GAGTCTCCCACCAGCAGTTC