Insertion junction: CLIP2.048403_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048403
Chromosome:chromosome 3
Location:2479408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159200 UBC8 (1 of 2) K10589 - ubiquitin-protein ligase E3 C (UBE3C); Putative ubiquitin-protein ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCTGCTGTATCCAGTATACATAGCTGGCAGTAACGCGAAGCTGACT
Internal bar code:AAATGACGTGCGGTGAAAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2307
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGGGCCACACAAGATGG
Suggested primer 2:CACATGGGACTATGGGAGGC