Insertion junction: CLIP2.048404_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048404
Chromosome:chromosome 3
Location:1274573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGCGGCACCAACGACCTCGGGCATCCAGCCATCCATGCCGCCGTCAA
Internal bar code:CGTTTAAGTGTTTTCTGGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1277
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCAACACGAGCGAAAAC
Suggested primer 2:CCAAACTTTCACACAGCGGG