Insertion junction: CLIP2.048410_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048410
Chromosome:chromosome 13
Location:4201128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591550 SRR20 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) PTHR19331//PTHR19331:SF279 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAAGCAGTTAGGACTGAGAAGGGATGGGGACCGCGGTACACTCGCGAG
Internal bar code:GTGAATGTTATACCTGACTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCCAATCACTGCATGCC
Suggested primer 2:TCACGGCCATTGTACTTGCT